SNP Detail For rs7708584
1.Mapping Information
Human SNP ID rs7708584
Human chromosome chr5
Human SNP position 154163906
Pig chromosome chr16
Pig SNP position 74875803
2.Annotation Information
PubMed ID23583978
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583978
StudyA meta-analysis identifies new loci associated with body mass index in individuals of African ancestry.
Disease/TraitBody mass index
Initial sample37,956 African American individuals, 1,188 Nigerian ancestry individuals
Replication sample27,661 African America/Afro-Caribbean individuals, 4,607 Sub-Saharan African ancestry individuals, 123,706 European ancestry inidividuals
Region5q33.2
Chromosome idchr5
Chromosome position154163906
Reported geneGALNT10
Mapped geneMFAP3 - GALNT10
Upstream gene id4238
Downstream gene id55568
SNP gene ids
Upstream gene distance106452
Downstream gene distance26829
SNP risk allelers7708584-A
SNPsrs7708584
Merged0
SNP id current7708584
Contextintron_variant
Intergenic1
Allele frequency0.42
P value0.00000000000005
Pvalue mlog13.3010299956639
P value text
Or beta0.021
%95 Ci[0.012-0.030] unit increase
PlatformAffymetrix, Illumina [3283202] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST001967