Human SNP ID | rs7708584 |
---|---|
Human chromosome | chr5 |
Human SNP position | 154163906 |
Pig chromosome | chr16 |
Pig SNP position | 74875803 |
PubMed ID | 23583978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23583978 |
Study | A meta-analysis identifies new loci associated with body mass index in individuals of African ancestry. |
Disease/Trait | Body mass index |
Initial sample | 37,956 African American individuals, 1,188 Nigerian ancestry individuals |
Replication sample | 27,661 African America/Afro-Caribbean individuals, 4,607 Sub-Saharan African ancestry individuals, 123,706 European ancestry inidividuals |
Region | 5q33.2 |
Chromosome id | chr5 |
Chromosome position | 154163906 |
Reported gene | GALNT10 |
Mapped gene | MFAP3 - GALNT10 |
Upstream gene id | 4238 |
Downstream gene id | 55568 |
SNP gene ids | |
Upstream gene distance | 106452 |
Downstream gene distance | 26829 |
SNP risk allele | rs7708584-A |
SNPs | rs7708584 |
Merged | 0 |
SNP id current | 7708584 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.42 |
P value | 0.00000000000005 |
Pvalue mlog | 13.3010299956639 |
P value text | |
Or beta | 0.021 |
%95 Ci | [0.012-0.030] unit increase |
Platform | Affymetrix, Illumina [3283202] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001967 |