Human SNP ID | rs7702276 |
---|---|
Human chromosome | chr5 |
Human SNP position | 52509908 |
Pig chromosome | chr16 |
Pig SNP position | 33733443 |
PubMed ID | 23419831 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23419831 |
Study | APOE and BCHE as modulators of cerebral amyloid deposition: a florbetapir PET genome-wide association study. |
Disease/Trait | Alzheimer__s disease biomarkers |
Initial sample | 555 European ancestry individuals |
Replication sample | NA |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 52509908 |
Reported gene | ITGA1 |
Mapped gene | LOC105378962 - LOC105378963 |
Upstream gene id | 105378962 |
Downstream gene id | 105378963 |
SNP gene ids | |
Upstream gene distance | 170674 |
Downstream gene distance | 164781 |
SNP risk allele | rs7702276-T |
SNPs | rs7702276 |
Merged | 0 |
SNP id current | 7702276 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.36 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (Cortical Ab) |
Or beta | |
%95 Ci | |
Platform | Illumina [6108668] (imputed) |
CNV | N |
Mapped trait | amyloid-beta measurement, Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005194, http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST001868 |