SNP Detail For rs7702276
1.Mapping Information
Human SNP ID rs7702276
Human chromosome chr5
Human SNP position 52509908
Pig chromosome chr16
Pig SNP position 33733443
2.Annotation Information
PubMed ID23419831
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23419831
StudyAPOE and BCHE as modulators of cerebral amyloid deposition: a florbetapir PET genome-wide association study.
Disease/TraitAlzheimer__s disease biomarkers
Initial sample555 European ancestry individuals
Replication sampleNA
Region5q11.2
Chromosome idchr5
Chromosome position52509908
Reported geneITGA1
Mapped geneLOC105378962 - LOC105378963
Upstream gene id105378962
Downstream gene id105378963
SNP gene ids
Upstream gene distance170674
Downstream gene distance164781
SNP risk allelers7702276-T
SNPsrs7702276
Merged0
SNP id current7702276
Contextintergenic_variant
Intergenic1
Allele frequency0.36
P value0.000001
Pvalue mlog6
P value text(Cortical Ab)
Or beta
%95 Ci
PlatformIllumina [6108668] (imputed)
CNVN
Mapped traitamyloid-beta measurement, Alzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005194, http://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001868