SNP Detail For rs76956521
1.Mapping Information
Human SNP ID rs76956521
Human chromosome chr5
Human SNP position 151085080
Pig chromosome chr16
Pig SNP position 78343365
2.Annotation Information
PubMed ID26626624
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26626624
StudyGenome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.
Disease/TraitPsoriatic arthritis
Initial sample1,946 European ancestry cases, 4,934 European ancestry controls
Replication sampleup to 2,883 European ancestry cases, up to 14,179 European ancestry controls
Region5q33.1
Chromosome idchr5
Chromosome position151085080
Reported geneTNIP1, ANXA6
Mapped geneTNIP1
Upstream gene id
Downstream gene id
SNP gene ids10318
Upstream gene distance
Downstream gene distance
SNP risk allelers76956521-C
SNPsrs76956521
Merged0
SNP id current76956521
Contextintron_variant
Intergenic0
Allele frequencyNR
P value3E-23
Pvalue mlog22.5228787452803
P value text
Or beta1.793
%95 CiNR
PlatformIllumina [11532644] (imputed)
CNVN
Mapped traitpsoriatic arthritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003778
Study accessionGCST003270