Human SNP ID | rs76873050 |
---|---|
Human chromosome | chr4 |
Human SNP position | 181194263 |
Pig chromosome | chr15 |
Pig SNP position | 49279484 |
PubMed ID | 26634245 |
---|---|
Journal | BMC Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26634245 |
Study | A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry. |
Disease/Trait | Post bronchodilator FEV1 |
Initial sample | 10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals |
Replication sample | NA |
Region | 4q34.3 |
Chromosome id | chr4 |
Chromosome position | 181194263 |
Reported gene | Intergenic |
Mapped gene | LINC00290 - LOC101928679 |
Upstream gene id | 728081 |
Downstream gene id | 101928679 |
SNP gene ids | |
Upstream gene distance | 35114 |
Downstream gene distance | 66477 |
SNP risk allele | rs76873050-T |
SNPs | rs76873050 |
Merged | 0 |
SNP id current | 76873050 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.073 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.088 |
%95 Ci | NR unit increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | forced expiratory volume, response to bronchodilator |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366 |
Study accession | GCST003262 |