Human SNP ID | rs7686660 |
---|---|
Human chromosome | chr4 |
Human SNP position | 143082006 |
Pig chromosome | chr8 |
Pig SNP position | 89851016 |
PubMed ID | 21804548 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21804548 |
Study | Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population. |
Disease/Trait | Asthma |
Initial sample | 1,532 Japanese ancestry cases, 3,304 Japanese ancestry controls |
Replication sample | 5,639 Japanese ancestry cases, 24,608 Japanese ancestry controls |
Region | 4q31.21 |
Chromosome id | chr4 |
Chromosome position | 143082006 |
Reported gene | LOC729675 |
Mapped gene | INPP4B - LOC105377623 |
Upstream gene id | 8821 |
Downstream gene id | 105377623 |
SNP gene ids | |
Upstream gene distance | 235471 |
Downstream gene distance | 95731 |
SNP risk allele | rs7686660-T |
SNPs | rs7686660 |
Merged | 0 |
SNP id current | 7686660 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.27 |
P value | 0.000000000002 |
Pvalue mlog | 11.698970004336 |
P value text | |
Or beta | 1.16 |
%95 Ci | [1.11-1.21] |
Platform | Illumina [458847] |
CNV | N |
Mapped trait | asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST001183 |