SNP Detail For rs7686660
1.Mapping Information
Human SNP ID rs7686660
Human chromosome chr4
Human SNP position 143082006
Pig chromosome chr8
Pig SNP position 89851016
2.Annotation Information
PubMed ID21804548
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21804548
StudyGenome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population.
Disease/TraitAsthma
Initial sample1,532 Japanese ancestry cases, 3,304 Japanese ancestry controls
Replication sample5,639 Japanese ancestry cases, 24,608 Japanese ancestry controls
Region4q31.21
Chromosome idchr4
Chromosome position143082006
Reported geneLOC729675
Mapped geneINPP4B - LOC105377623
Upstream gene id8821
Downstream gene id105377623
SNP gene ids
Upstream gene distance235471
Downstream gene distance95731
SNP risk allelers7686660-T
SNPsrs7686660
Merged0
SNP id current7686660
Contextintron_variant
Intergenic1
Allele frequency0.27
P value0.000000000002
Pvalue mlog11.698970004336
P value text
Or beta1.16
%95 Ci[1.11-1.21]
PlatformIllumina [458847]
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST001183