SNP Detail For rs768048
1.Mapping Information
Human SNP ID rs768048
Human chromosome chr18
Human SNP position 52759028
Pig chromosome chr1
Pig SNP position 112372392
2.Annotation Information
PubMed ID21529783
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21529783
StudyA quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.
Disease/TraitAlcoholism (alcohol use disorder factor score)
Initial sample2,062 European ancestry alcohol dependence cases, 6,692 European ancestry controls
Replication sample3,393 European ancestry individuals
Region18q21.2
Chromosome idchr18
Chromosome position52759028
Reported geneDCC
Mapped geneDCC
Upstream gene id
Downstream gene id
SNP gene ids1630
Upstream gene distance
Downstream gene distance
SNP risk allelers768048-C
SNPsrs768048
Merged0
SNP id current768048
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.12
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta0.11
%95 Ci[NR] unit increase
PlatformIllumina [~ 300000]
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001053