Human SNP ID | rs768048 |
---|---|
Human chromosome | chr18 |
Human SNP position | 52759028 |
Pig chromosome | chr1 |
Pig SNP position | 112372392 |
PubMed ID | 21529783 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/21529783 |
Study | A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications. |
Disease/Trait | Alcoholism (alcohol use disorder factor score) |
Initial sample | 2,062 European ancestry alcohol dependence cases, 6,692 European ancestry controls |
Replication sample | 3,393 European ancestry individuals |
Region | 18q21.2 |
Chromosome id | chr18 |
Chromosome position | 52759028 |
Reported gene | DCC |
Mapped gene | DCC |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1630 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs768048-C |
SNPs | rs768048 |
Merged | 0 |
SNP id current | 768048 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.12 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.11 |
%95 Ci | [NR] unit increase |
Platform | Illumina [~ 300000] |
CNV | N |
Mapped trait | alcohol dependence |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003829 |
Study accession | GCST001053 |