Human SNP ID | rs7666129 |
---|---|
Human chromosome | chr4 |
Human SNP position | 188576910 |
Pig chromosome | chr17 |
Pig SNP position | 7809272 |
PubMed ID | 25574032 |
---|---|
Journal | Hum Reprod |
Link | www.ncbi.nlm.nih.gov/pubmed/25574032 |
Study | Genome-wide association study identified new susceptibility loci for polycystic ovary syndrome. |
Disease/Trait | Polycystic ovary syndrome |
Initial sample | 976 Korean ancestry cases, 946 Korean ancestry controls |
Replication sample | 249 Korean ancestry cases, 778 Korean ancestry controls |
Region | 4q35.2 |
Chromosome id | chr4 |
Chromosome position | 188576910 |
Reported gene | TRIML1, TRIML2 |
Mapped gene | LINC01060 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 401164 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7666129-A |
SNPs | rs7666129 |
Merged | 0 |
SNP id current | 7666129 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.75 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.59 |
%95 Ci | [NR] |
Platform | Illumina [636870] |
CNV | N |
Mapped trait | polycystic ovary syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000660 |
Study accession | GCST002741 |