SNP Detail For rs7666129
1.Mapping Information
Human SNP ID rs7666129
Human chromosome chr4
Human SNP position 188576910
Pig chromosome chr17
Pig SNP position 7809272
2.Annotation Information
PubMed ID25574032
JournalHum Reprod
Linkwww.ncbi.nlm.nih.gov/pubmed/25574032
StudyGenome-wide association study identified new susceptibility loci for polycystic ovary syndrome.
Disease/TraitPolycystic ovary syndrome
Initial sample976 Korean ancestry cases, 946 Korean ancestry controls
Replication sample249 Korean ancestry cases, 778 Korean ancestry controls
Region4q35.2
Chromosome idchr4
Chromosome position188576910
Reported geneTRIML1, TRIML2
Mapped geneLINC01060
Upstream gene id
Downstream gene id
SNP gene ids401164
Upstream gene distance
Downstream gene distance
SNP risk allelers7666129-A
SNPsrs7666129
Merged0
SNP id current7666129
Contextintron_variant
Intergenic0
Allele frequency0.75
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.59
%95 Ci[NR]
PlatformIllumina [636870]
CNVN
Mapped traitpolycystic ovary syndrome
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000660
Study accessionGCST002741