SNP Detail For rs7665939
1.Mapping Information
Human SNP ID rs7665939
Human chromosome chr4
Human SNP position 189202164
Pig chromosome chr17
Pig SNP position 7176817
2.Annotation Information
PubMed ID22959728
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/22959728
StudyAge of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1.
Disease/TraitAmyotrophic lateral sclerosis
Initial sample4,243 European ancestry cases, 5,112 European ancestry controls
Replication sampleNA
Region4q35.2
Chromosome idchr4
Chromosome position189202164
Reported geneintergenic
Mapped geneLOC105377613 - LOC105377614
Upstream gene id105377613
Downstream gene id105377614
SNP gene ids
Upstream gene distance75989
Downstream gene distance162176
SNP risk allelers7665939-?
SNPsrs7665939
Merged0
SNP id current7665939
Contextintron_variant
Intergenic1
Allele frequency0.11
P value0.000009
Pvalue mlog5.04575749056067
P value text(Meta)
Or beta1.2346
%95 Ci[1.11-1.39]
PlatformIllumina [254145]
CNVN
Mapped traitamyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253
Study accessionGCST001664