Human SNP ID | rs7665939 |
---|---|
Human chromosome | chr4 |
Human SNP position | 189202164 |
Pig chromosome | chr17 |
Pig SNP position | 7176817 |
PubMed ID | 22959728 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/22959728 |
Study | Age of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1. |
Disease/Trait | Amyotrophic lateral sclerosis |
Initial sample | 4,243 European ancestry cases, 5,112 European ancestry controls |
Replication sample | NA |
Region | 4q35.2 |
Chromosome id | chr4 |
Chromosome position | 189202164 |
Reported gene | intergenic |
Mapped gene | LOC105377613 - LOC105377614 |
Upstream gene id | 105377613 |
Downstream gene id | 105377614 |
SNP gene ids | |
Upstream gene distance | 75989 |
Downstream gene distance | 162176 |
SNP risk allele | rs7665939-? |
SNPs | rs7665939 |
Merged | 0 |
SNP id current | 7665939 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.11 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Meta) |
Or beta | 1.2346 |
%95 Ci | [1.11-1.39] |
Platform | Illumina [254145] |
CNV | N |
Mapped trait | amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000253 |
Study accession | GCST001664 |