SNP Detail For rs7664442
1.Mapping Information
Human SNP ID rs7664442
Human chromosome chr4
Human SNP position 23017081
Pig chromosome chr8
Pig SNP position 17563122
2.Annotation Information
PubMed ID26451028
JournalStroke
Linkwww.ncbi.nlm.nih.gov/pubmed/26451028
StudyWhite Matter Lesion Progression: Genome-Wide Search for Genetic Influences.
Disease/TraitWhite matter lesion progression (adjusted for white matter lesion burden at baseline)
Initial sample1,085 European ancestry elderly cases, 6,688 European ancestry elderly controls
Replication sampleNA
Region4p15.2
Chromosome idchr4
Chromosome position23017081
Reported geneGBA3
Mapped geneLOC105374524
Upstream gene id
Downstream gene id
SNP gene ids105374524
Upstream gene distance
Downstream gene distance
SNP risk allelers7664442-G
SNPsrs7664442
Merged
SNP id current7664442
Contextintron_variant
Intergenic0
Allele frequency0.08
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.5384616
%95 Ci[NR]
PlatformAffymetrix, Illumina [up to 2543887] (imputed)
CNVN
Mapped traitwhite matter lesion progression measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007746
Study accessionGCST003152