SNP Detail For rs765855
1.Mapping Information
Human SNP ID rs765855
Human chromosome chr7
Human SNP position 8512984
Pig chromosome chr9
Pig SNP position 86390796
2.Annotation Information
PubMed ID23544013
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23544013
StudyGenome-wide association study in BRCA1 mutation carriers identifies novel loci associated with breast and ovarian cancer risk.
Disease/TraitBreast Cancer in BRCA1 mutation carriers
Initial sample1,426 European ancestry cases, 1,301 European ancestry controls
Replication sample6,031 European ancestry cases, 5,933 European ancestry controls
Region7p21.3
Chromosome idchr7
Chromosome position8512984
Reported geneNR
Mapped geneNXPH1
Upstream gene id
Downstream gene id
SNP gene ids30010
Upstream gene distance
Downstream gene distance
SNP risk allelers765855-?
SNPsrs765855
Merged0
SNP id current765855
Contextintron_variant
Intergenic0
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformIllumina [2568349] (imputed)
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST001916