SNP Detail For rs7655841
1.Mapping Information
Human SNP ID rs7655841
Human chromosome chr4
Human SNP position 128969635
Pig chromosome chr8
Pig SNP position 102932434
2.Annotation Information
PubMed ID24621683
JournalLancet Respir Med
Linkwww.ncbi.nlm.nih.gov/pubmed/24621683
StudyRisk loci for chronic obstructive pulmonary disease: a genome-wide association study and meta-analysis.
Disease/TraitChronic obstructive pulmonary disease (moderate to severe)
Initial sample5,812 European ancestry cases, 3,955 European ancestry controls, 821 African American cases, 1,749 African American controls
Replication sample2,651 cases and their relatives
Region4q28.2
Chromosome idchr4
Chromosome position128969635
Reported geneSCLT1
Mapped geneSCLT1
Upstream gene id
Downstream gene id
SNP gene ids132320
Upstream gene distance
Downstream gene distance
SNP risk allelers7655841-?
SNPsrs7655841
Merged0
SNP id current7655841
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000007
Pvalue mlog6.15490195998574
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [up to 701491] (imputed)
CNVN
Mapped traitchronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST002351