Human SNP ID | rs7655841 |
---|---|
Human chromosome | chr4 |
Human SNP position | 128969635 |
Pig chromosome | chr8 |
Pig SNP position | 102932434 |
PubMed ID | 24621683 |
---|---|
Journal | Lancet Respir Med |
Link | www.ncbi.nlm.nih.gov/pubmed/24621683 |
Study | Risk loci for chronic obstructive pulmonary disease: a genome-wide association study and meta-analysis. |
Disease/Trait | Chronic obstructive pulmonary disease (moderate to severe) |
Initial sample | 5,812 European ancestry cases, 3,955 European ancestry controls, 821 African American cases, 1,749 African American controls |
Replication sample | 2,651 cases and their relatives |
Region | 4q28.2 |
Chromosome id | chr4 |
Chromosome position | 128969635 |
Reported gene | SCLT1 |
Mapped gene | SCLT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 132320 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7655841-? |
SNPs | rs7655841 |
Merged | 0 |
SNP id current | 7655841 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (AA) |
Or beta | |
%95 Ci | |
Platform | Illumina [up to 701491] (imputed) |
CNV | N |
Mapped trait | chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST002351 |