SNP Detail For rs76550486
1.Mapping Information
Human SNP ID rs76550486
Human chromosome chr5
Human SNP position 45479793
Pig chromosome chr16
Pig SNP position 31146051
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region5p12
Chromosome idchr5
Chromosome position45479793
Reported geneHCN1
Mapped geneHCN1
Upstream gene id
Downstream gene id
SNP gene ids348980
Upstream gene distance
Downstream gene distance
SNP risk allelers76550486-A
SNPsrs76550486
Merged0
SNP id current76550486
Contextintron_variant
Intergenic0
Allele frequency0.998
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.31
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264