SNP Detail For rs7647973
1.Mapping Information
Human SNP ID rs7647973
Human chromosome chr3
Human SNP position 49473498
Pig chromosome JH118489-1
Pig SNP position 59743
2.Annotation Information
PubMed ID25231870
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25231870
StudyParent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
Disease/TraitMenarche (age at onset)
Initial sampleUp to 182,413 European ancestry females
Replication sampleNA
Region3p21.31
Chromosome idchr3
Chromosome position49473498
Reported geneWDR6, UBA7
Mapped geneDAG1
Upstream gene id
Downstream gene id
SNP gene ids1605
Upstream gene distance
Downstream gene distance
SNP risk allelers7647973-A
SNPsrs7647973
Merged0
SNP id current7647973
Contextintron_variant
Intergenic0
Allele frequency0.26
P value0.0000000000000001
Pvalue mlog16
P value text
Or beta0.05
%95 Ci[0.038-0.062] unit increase
PlatformAffymetrix, Illumina [2441815] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST002541