Human SNP ID | rs7644516 |
---|---|
Human chromosome | chr3 |
Human SNP position | 25880794 |
Pig chromosome | chr13 |
Pig SNP position | 14386597 |
PubMed ID | 23725790 |
---|---|
Journal | Twin Res Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23725790 |
Study | GWAS of DNA methylation variation within imprinting control regions suggests parent-of-origin association. |
Disease/Trait | DNA methylation (variation) |
Initial sample | 256 European ancestry individuals |
Replication sample | 384 European ancestry individuals |
Region | 3p24.2 |
Chromosome id | chr3 |
Chromosome position | 25880794 |
Reported gene | AC103588.1 |
Mapped gene | LINC00692 - LOC105377001 |
Upstream gene id | 285326 |
Downstream gene id | 105377001 |
SNP gene ids | |
Upstream gene distance | 7099 |
Downstream gene distance | 184080 |
SNP risk allele | rs7644516-G |
SNPs | rs7644516 |
Merged | 0 |
SNP id current | 7644516 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.12 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (KvDMR) |
Or beta | |
%95 Ci | |
Platform | Illumina [515966] |
CNV | N |
Mapped trait | DNA methylation |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0006306 |
Study accession | GCST002058 |