SNP Detail For rs7641175
1.Mapping Information
Human SNP ID rs7641175
Human chromosome chr3
Human SNP position 18269920
Pig chromosome chr13
Pig SNP position 5922702
2.Annotation Information
PubMed ID22139419
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/22139419
StudyNew gene functions in megakaryopoiesis and platelet formation.
Disease/TraitPlatelet count
Initial sample47,005 European ancestry individuals, 1,661 Val Borbera individuals
Replication sampleUp to 18,838 European ancestry individuals
Region3p24.3
Chromosome idchr3
Chromosome position18269920
Reported geneSATB1
Mapped geneLOC339862 - SATB1
Upstream gene id339862
Downstream gene id6304
SNP gene ids
Upstream gene distance998
Downstream gene distance75886
SNP risk allelers7641175-A
SNPsrs7641175
Merged0
SNP id current7641175
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.00000000003
Pvalue mlog10.5228787452803
P value text
Or beta2.757
%95 Ci[1.94-3.57] 10^9/l increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitplatelet count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004309
Study accessionGCST001337