Human SNP ID | rs7633075 |
---|---|
Human chromosome | chr3 |
Human SNP position | 18540356 |
Pig chromosome | chr4 |
Pig SNP position | 18954784 |
PubMed ID | 24159190 |
---|---|
Journal | Eur Heart J |
Link | www.ncbi.nlm.nih.gov/pubmed/24159190 |
Study | Genome-wide association study on dimethylarginines reveals novel AGXT2 variants associated with heart rate variability but not with overall mortality. |
Disease/Trait | Symmetrical dimethylarginine levels |
Initial sample | 5110 European ancestry individuals |
Replication sample | NA |
Region | 3p24.3 |
Chromosome id | chr3 |
Chromosome position | 18540356 |
Reported gene | NR |
Mapped gene | SATB1-AS1 - LOC101927805 |
Upstream gene id | 101927777 |
Downstream gene id | 101927805 |
SNP gene ids | |
Upstream gene distance | 10242 |
Downstream gene distance | 45030 |
SNP risk allele | rs7633075-T |
SNPs | rs7633075 |
Merged | 0 |
SNP id current | 7633075 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.134 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.133 |
%95 Ci | [0.076-0.19] unit decrease |
Platform | Affymetrix, Illumina [10085758] (imputed) |
CNV | N |
Mapped trait | serum dimethylarginine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005418 |
Study accession | GCST002239 |