SNP Detail For rs7632070
1.Mapping Information
Human SNP ID rs7632070
Human chromosome chr3
Human SNP position 117308665
Pig chromosome chr13
Pig SNP position 152277465
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitParasitemia in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region3q13.31
Chromosome idchr3
Chromosome position117308665
Reported geneNR
Mapped geneLOC105374054 - LOC105374055
Upstream gene id105374054
Downstream gene id105374055
SNP gene ids
Upstream gene distance49117
Downstream gene distance49479
SNP risk allelers7632070-?
SNPsrs7632070
Merged0
SNP id current7632070
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitparasitemia measurement, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005528, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002282