SNP Detail For rs7629245
1.Mapping Information
Human SNP ID rs7629245
Human chromosome chr3
Human SNP position 185424069
Pig chromosome chr13
Pig SNP position 132662804
2.Annotation Information
PubMed ID22837378
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/22837378
StudyGenome-wide association studies identify CHRNA5/3 and HTR4 in the development of airflow obstruction.
Disease/TraitAirflow obstruction
Initial sampleup to 3,368 European ancestry cases, up to 29,507 European ancestry controls
Replication sample331 European ancestry cases, 2,550 European ancestry controls
Region3q27.2
Chromosome idchr3
Chromosome position185424069
Reported geneMAP3K13
Mapped geneMAP3K13
Upstream gene id
Downstream gene id
SNP gene ids9175
Upstream gene distance
Downstream gene distance
SNP risk allelers7629245-T
SNPsrs7629245
Merged0
SNP id current7629245
Contextintron_variant
Intergenic0
Allele frequency0.15
P value0.000009
Pvalue mlog5.04575749056067
P value text(Smoker)
Or beta1.22
%95 Ci[NR]
PlatformAffymetrix, Illumina [up to 2500000] (imputed)
CNVN
Mapped traitpulmonary function measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003892
Study accessionGCST001621