SNP Detail For rs7625806
1.Mapping Information
Human SNP ID rs7625806
Human chromosome chr3
Human SNP position 38039461
Pig chromosome chr13
Pig SNP position 24816073
2.Annotation Information
PubMed ID26343869
JournalAtherosclerosis
Linkwww.ncbi.nlm.nih.gov/pubmed/26343869
StudyGenome-wide association study on progression of carotid artery intima media thickness over 10 years in a Chinese cohort.
Disease/TraitCarotid intima media thickness
Initial sample810 Chinese ancestry individuals
Replication sampleNA
Region3p22.2
Chromosome idchr3
Chromosome position38039461
Reported geneDLEC1
Mapped geneDLEC1
Upstream gene id
Downstream gene id
SNP gene ids9940
Upstream gene distance
Downstream gene distance
SNP risk allelers7625806-?
SNPsrs7625806
Merged
SNP id current7625806
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text(Multiple-adjusted)
Or beta
%95 Ci
PlatformIllumina [32817]
CNVN
Mapped traitcarotid artery intima media thickness
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007117
Study accessionGCST003114