SNP Detail For rs761998
1.Mapping Information
Human SNP ID rs761998
Human chromosome chr20
Human SNP position 14329306
Pig chromosome chr17
Pig SNP position 25676032
2.Annotation Information
PubMed ID25897833
JournalTransl Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25897833
StudyGenome-wide association study of behavioural and psychiatric features in human prion disease.
Disease/TraitMood disorder in prion disease
Initial sampleUp to 170 cases
Replication sampleNA
Region20p12.1
Chromosome idchr20
Chromosome position14329306
Reported geneFLRT3
Mapped geneFLRT3, MACROD2
Upstream gene id
Downstream gene id
SNP gene ids23767, 140733
Upstream gene distance
Downstream gene distance
SNP risk allelers761998-?
SNPsrs761998
Merged0
SNP id current761998
Context5_prime_UTR_variant
Intergenic0
Allele frequency0.352
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta2.86
%95 Ci[1.82-4.55]
PlatformIllumina [518938]
CNVN
Mapped traitprion disease, mood disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004720, http://www.ebi.ac.uk/efo/EFO_0004247
Study accessionGCST002864