SNP Detail For rs7612463
1.Mapping Information
Human SNP ID rs7612463
Human chromosome chr3
Human SNP position 23294959
Pig chromosome chr13
Pig SNP position 11415724
2.Annotation Information
PubMed ID24509480
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24509480
StudyGenome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.
Disease/TraitType 2 diabetes
Initial sample12,171 European ancestry cases, 56,862 European ancestry controls, 6,952 East Asian ancestry cases, 11,865 East Asian ancestry controls, 5,561 South Asian ancestry cases, 14,458 South Asian ancestry controls, 1,804 Mexican ancestry cases, 779 Mexican ance
Replication sample21,491 European ancestry cases, 55,647 European ancestry controls
Region3p24.3
Chromosome idchr3
Chromosome position23294959
Reported geneUBE2E2
Mapped geneUBE2E2
Upstream gene id
Downstream gene id
SNP gene ids7325
Upstream gene distance
Downstream gene distance
SNP risk allelers7612463-C
SNPsrs7612463
Merged0
SNP id current7612463
Contextintron_variant
Intergenic0
Allele frequency0.87
P value0.000000007
Pvalue mlog8.15490195998574
P value text
Or beta1.1
%95 Ci[1.04-1.16]
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST002352