SNP Detail For rs7612445
1.Mapping Information
Human SNP ID rs7612445
Human chromosome chr3
Human SNP position 179455191
Pig chromosome chr13
Pig SNP position 126611363
2.Annotation Information
PubMed ID23583979
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583979
StudyIdentification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.
Disease/TraitHeart rate
Initial sample85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals
Replication sample88,823 European ancestry individuals
Region3q26.33
Chromosome idchr3
Chromosome position179455191
Reported geneGNB4
Mapped geneGNB4 - ACTL6A
Upstream gene id59345
Downstream gene id86
SNP gene ids
Upstream gene distance3608
Downstream gene distance107689
SNP risk allelers7612445-G
SNPsrs7612445
Merged0
SNP id current7612445
Contextupstream_gene_variant
Intergenic1
Allele frequency0.816
P value0.00000000000002
Pvalue mlog13.698970004336
P value text
Or beta0.358
%95 Ci[0.24-0.48] unit increase
PlatformAffymetrix, Illumina [2516789] (imputed)
CNVN
Mapped traitheart rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004326
Study accessionGCST001969