Human SNP ID | rs76010824 |
---|---|
Human chromosome | chr3 |
Human SNP position | 67392218 |
Pig chromosome | chr13 |
Pig SNP position | 53684781 |
PubMed ID | 26307654 |
---|---|
Journal | Cancer Epidemiol Biomarkers Prev |
Link | www.ncbi.nlm.nih.gov/pubmed/26307654 |
Study | Genome-Wide Association Study of Prostate Cancer-Specific Survival. |
Disease/Trait | Prostate cancer (survival) |
Initial sample | 7,322 cases |
Replication sample | 18,197 European ancestry cases |
Region | 3p14.1 |
Chromosome id | chr3 |
Chromosome position | 67392218 |
Reported gene | NR |
Mapped gene | SUCLG2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8801 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs76010824-A |
SNPs | rs76010824 |
Merged | |
SNP id current | 76010824 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.07 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 1.26 |
%95 Ci | [1.16-1.38] |
Platform | Affymetrix, Illumina [up to 9536409] (imputed) |
CNV | N |
Mapped trait | survival time, prostate carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000714, http://www.ebi.ac.uk/efo/EFO_0001663 |
Study accession | GCST003100 |