SNP Detail For rs7600259
1.Mapping Information
Human SNP ID rs7600259
Human chromosome chr2
Human SNP position 34868226
Pig chromosome chr3
Pig SNP position 111753018
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region2p22.3
Chromosome idchr2
Chromosome position34868226
Reported geneintergenic
Mapped geneLOC105374458 - LOC105374460
Upstream gene id105374458
Downstream gene id105374460
SNP gene ids
Upstream gene distance131708
Downstream gene distance75540
SNP risk allelers7600259-?
SNPsrs7600259
Merged0
SNP id current7600259
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(SF9)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651