Human SNP ID | rs7593730 |
---|---|
Human chromosome | chr2 |
Human SNP position | 160314943 |
Pig chromosome | chr15 |
Pig SNP position | 74458515 |
PubMed ID | 20418489 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20418489 |
Study | Genetic variants at 2q24 are associated with susceptibility to type 2 diabetes. |
Disease/Trait | Type 2 diabetes |
Initial sample | 2,591 European ancestry cases, 3,052 European ancestry controls |
Replication sample | 10,870 European ancestry cases, 73,735 European ancestry controls |
Region | 2q24.2 |
Chromosome id | chr2 |
Chromosome position | 160314943 |
Reported gene | ITGB6, RBMS1 |
Mapped gene | RBMS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5937 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7593730-? |
SNPs | rs7593730 |
Merged | 0 |
SNP id current | 7593730 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.78 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 1.11 |
%95 Ci | [1.08-1.16] |
Platform | Affymetrix [683509] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST000665 |