SNP Detail For rs7593730
1.Mapping Information
Human SNP ID rs7593730
Human chromosome chr2
Human SNP position 160314943
Pig chromosome chr15
Pig SNP position 74458515
2.Annotation Information
PubMed ID20418489
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20418489
StudyGenetic variants at 2q24 are associated with susceptibility to type 2 diabetes.
Disease/TraitType 2 diabetes
Initial sample2,591 European ancestry cases, 3,052 European ancestry controls
Replication sample10,870 European ancestry cases, 73,735 European ancestry controls
Region2q24.2
Chromosome idchr2
Chromosome position160314943
Reported geneITGB6, RBMS1
Mapped geneRBMS1
Upstream gene id
Downstream gene id
SNP gene ids5937
Upstream gene distance
Downstream gene distance
SNP risk allelers7593730-?
SNPsrs7593730
Merged0
SNP id current7593730
Contextintron_variant
Intergenic0
Allele frequency0.78
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta1.11
%95 Ci[1.08-1.16]
PlatformAffymetrix [683509]
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST000665