SNP Detail For rs75900745
1.Mapping Information
Human SNP ID rs75900745
Human chromosome chr4
Human SNP position 137169858
Pig chromosome chr8
Pig SNP position 94896856
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitPR interval in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region4q28.3
Chromosome idchr4
Chromosome position137169858
Reported geneNR
Mapped geneLOC105377441 - LOC729307
Upstream gene id105377441
Downstream gene id729307
SNP gene ids
Upstream gene distance202540
Downstream gene distance23898
SNP risk allelers75900745-?
SNPsrs75900745
Merged0
SNP id current75900745
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitPR interval, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002279