SNP Detail For rs7589728
1.Mapping Information
Human SNP ID rs7589728
Human chromosome chr2
Human SNP position 88218921
Pig chromosome chr3
Pig SNP position 60462585
2.Annotation Information
PubMed ID26545630
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/26545630
StudyA potential endophenotype for Alzheimer__s disease: cerebrospinal fluid clusterin.
Disease/TraitPlasma clusterin levels
Initial sample521 Alzheimer__s disease cases, 297 controls
Replication sampleNA
Region2p11.2
Chromosome idchr2
Chromosome position88218921
Reported geneTHNSL2
Mapped geneTHNSL2 - MRPL45P1
Upstream gene id55258
Downstream gene id359747
SNP gene ids
Upstream gene distance32284
Downstream gene distance145574
SNP risk allelers7589728-?
SNPsrs7589728
Merged
SNP id current7589728
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta
%95 Ci
PlatformIllumina [5970354] (imputed)
CNVN
Mapped traitplasma clusterin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007656
Study accessionGCST003133