SNP Detail For rs7586970
1.Mapping Information
Human SNP ID rs7586970
Human chromosome chr2
Human SNP position 187478770
Pig chromosome chr15
Pig SNP position 102548842
2.Annotation Information
PubMed ID21378988
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21378988
StudyA genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample8,424 European ancestry cases, 7,268 European ancestry controls, 6,996 South Asian ancestry cases, 7,794 South Asian ancestry controls
Replication sample18,049 European ancestry cases, 16,357 European ancestry controls, 3,359 South Asian ancestry cases, 2,828 South Asian ancestry controls
Region2q32.1
Chromosome idchr2
Chromosome position187478770
Reported geneintergenic
Mapped geneLOC105373786, TFPI
Upstream gene id
Downstream gene id
SNP gene ids105373786, 7035
Upstream gene distance
Downstream gene distance
SNP risk allelers7586970-?
SNPsrs7586970
Merged0
SNP id current7586970
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta
%95 Ci
PlatformIllumina [574919]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000999