SNP Detail For rs7582694
1.Mapping Information
Human SNP ID rs7582694
Human chromosome chr2
Human SNP position 191105394
Pig chromosome chr15
Pig SNP position 107036735
2.Annotation Information
PubMed ID26316170
JournalArthritis Rheumatol
Linkwww.ncbi.nlm.nih.gov/pubmed/26316170
StudyIdentification of a New Susceptibility Locus for Systemic Lupus Erythematosus on Chromosome 12 in Individuals of European Ancestry.
Disease/TraitSystemic lupus erythematosus
Initial sample661 European ancestry cases, 487 European ancestry controls
Replication sample4,467 European ancestry cases, 9,114 European ancestry controls
Region2q32.3
Chromosome idchr2
Chromosome position191105394
Reported geneSTAT4, STAT1
Mapped geneSTAT4
Upstream gene id
Downstream gene id
SNP gene ids6775
Upstream gene distance
Downstream gene distance
SNP risk allelers7582694-C
SNPsrs7582694
Merged
SNP id current7582694
Contextintron_variant
Intergenic0
Allele frequency0.216
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta1.811
%95 Ci[NR]
PlatformAffymetrix [up to 700598]
CNVN
Mapped traitsystemic lupus erythematosus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690
Study accessionGCST003103