Human SNP ID | rs7580332 |
---|---|
Human chromosome | chr2 |
Human SNP position | 18359378 |
Pig chromosome | chr3 |
Pig SNP position | 127726829 |
PubMed ID | 18084291 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18084291 |
Study | Genetic variation in DPP6 is associated with susceptibility to amyotrophic lateral sclerosis. |
Disease/Trait | Amyotrophic lateral sclerosis |
Initial sample | 737 European ancestry cases, 721 European ancestry controls |
Replication sample | 1,030 European ancestry cases, 1,195 European ancestry controls |
Region | 2p24.2 |
Chromosome id | chr2 |
Chromosome position | 18359378 |
Reported gene | intergenic |
Mapped gene | LOC105373451 - LOC105373452 |
Upstream gene id | 105373451 |
Downstream gene id | 105373452 |
SNP gene ids | |
Upstream gene distance | 47803 |
Downstream gene distance | 2212 |
SNP risk allele | rs7580332-? |
SNPs | rs7580332 |
Merged | 0 |
SNP id current | 7580332 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.45 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 1.22 |
%95 Ci | [1.09-1.35] |
Platform | Illumina [311946] |
CNV | N |
Mapped trait | amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000253 |
Study accession | GCST000127 |