SNP Detail For rs7580332
1.Mapping Information
Human SNP ID rs7580332
Human chromosome chr2
Human SNP position 18359378
Pig chromosome chr3
Pig SNP position 127726829
2.Annotation Information
PubMed ID18084291
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/18084291
StudyGenetic variation in DPP6 is associated with susceptibility to amyotrophic lateral sclerosis.
Disease/TraitAmyotrophic lateral sclerosis
Initial sample737 European ancestry cases, 721 European ancestry controls
Replication sample1,030 European ancestry cases, 1,195 European ancestry controls
Region2p24.2
Chromosome idchr2
Chromosome position18359378
Reported geneintergenic
Mapped geneLOC105373451 - LOC105373452
Upstream gene id105373451
Downstream gene id105373452
SNP gene ids
Upstream gene distance47803
Downstream gene distance2212
SNP risk allelers7580332-?
SNPsrs7580332
Merged0
SNP id current7580332
Contextintron_variant
Intergenic1
Allele frequency0.45
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.22
%95 Ci[1.09-1.35]
PlatformIllumina [311946]
CNVN
Mapped traitamyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253
Study accessionGCST000127