Human SNP ID | rs7578597 |
---|---|
Human chromosome | chr2 |
Human SNP position | 43505684 |
Pig chromosome | chr3 |
Pig SNP position | 102966987 |
PubMed ID | 18372903 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18372903 |
Study | Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes. |
Disease/Trait | Type 2 diabetes |
Initial sample | 4,549 European ancestry cases, 5,579 European ancestry controls |
Replication sample | 24,194 European ancestry cases, 55,598 European ancestry controls |
Region | 2p21 |
Chromosome id | chr2 |
Chromosome position | 43505684 |
Reported gene | THADA |
Mapped gene | THADA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 63892 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7578597-T |
SNPs | rs7578597 |
Merged | 0 |
SNP id current | 7578597 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.9 |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.10-1.20] |
Platform | Affymetrix, Illumina [2202892] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST000167 |