SNP Detail For rs7573615
1.Mapping Information
Human SNP ID rs7573615
Human chromosome chr2
Human SNP position 52999557
Pig chromosome chr3
Pig SNP position 93442491
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region2p16.2
Chromosome idchr2
Chromosome position52999557
Reported geneIntergenic
Mapped geneLOC105369165 - RNU6-997P
Upstream gene id105369165
Downstream gene id106480007
SNP gene ids
Upstream gene distance38066
Downstream gene distance570817
SNP risk allelers7573615-T
SNPsrs7573615
Merged0
SNP id current7573615
Contextintergenic_variant
Intergenic1
Allele frequency0.542
P value0.000005
Pvalue mlog5.30102999566398
P value text(AA)
Or beta0.014
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264