SNP Detail For rs75718479
1.Mapping Information
Human SNP ID rs75718479
Human chromosome chr12
Human SNP position 97483128
Pig chromosome chr5
Pig SNP position 90631014
2.Annotation Information
PubMed ID26443449
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26443449
StudyLarge-scale association analysis in Asians identifies new susceptibility loci for prostate cancer.
Disease/TraitProstate cancer
Initial sample3,000 East Asian ancestry cases, 4,394 East Asian ancestry controls
Replication sample3,605 East Asian ancestry cases, 3,919 East Asian ancestry controls
Region12q23.1
Chromosome idchr12
Chromosome position97483128
Reported geneRMST
Mapped geneRMST
Upstream gene id
Downstream gene id
SNP gene ids196475
Upstream gene distance
Downstream gene distance
SNP risk allelers75718479-C
SNPsrs75718479
Merged
SNP id current75718479
Contextintron_variant
Intergenic0
Allele frequency0.877
P value0.000001
Pvalue mlog6
P value text
Or beta1.22
%95 Ci[NR]
PlatformIllumina [4550396] (imputed)
CNVN
Mapped traitprostate carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001663
Study accessionGCST003148