SNP Detail For rs7571816
1.Mapping Information
Human SNP ID rs7571816
Human chromosome chr2
Human SNP position 232212354
Pig chromosome chr15
Pig SNP position 146597766
2.Annotation Information
PubMed ID20189936
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20189936
StudyA genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
Disease/TraitHeight
Initial sample19,633 Japanese ancestry individuals
Replication sampleNA
Region2q37.1
Chromosome idchr2
Chromosome position232212354
Reported geneDIS3L2
Mapped geneDIS3L2
Upstream gene id
Downstream gene id
SNP gene ids129563
Upstream gene distance
Downstream gene distance
SNP risk allelers7571816-A
SNPsrs7571816
Merged0
SNP id current7571816
Contextintron_variant
Intergenic0
Allele frequency0.45
P value0.000000009
Pvalue mlog8.04575749056067
P value text
Or beta0.06
%95 Ci[0.04-0.08] cm increase
PlatformIllumina [420885]
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000611