Human SNP ID | rs7570259 |
---|---|
Human chromosome | chr2 |
Human SNP position | 22979376 |
Pig chromosome | chr3 |
Pig SNP position | 122847168 |
PubMed ID | 25524916 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/25524916 |
Study | Genetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium. |
Disease/Trait | Glucose homeostasis traits |
Initial sample | up to 4,176 Mexican American individuals |
Replication sample | NA |
Region | 2p24.1 |
Chromosome id | chr2 |
Chromosome position | 22979376 |
Reported gene | intergenic |
Mapped gene | LOC105374322 - LOC101929251 |
Upstream gene id | 105374322 |
Downstream gene id | 101929251 |
SNP gene ids | |
Upstream gene distance | 434613 |
Downstream gene distance | 39599 |
SNP risk allele | rs7570259-? |
SNPs | rs7570259 |
Merged | 0 |
SNP id current | 7570259 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (SG) |
Or beta | 1.59 |
%95 Ci | [0.9-2.28] unit increase |
Platform | Illumina [693128] |
CNV | N |
Mapped trait | glucose homeostasis measurement, glucose effectiveness measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006833 |
Study accession | GCST002726 |