SNP Detail For rs75617866
1.Mapping Information
Human SNP ID rs75617866
Human chromosome chr5
Human SNP position 43858572
Pig chromosome chr2
Pig SNP position 59594404
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region5p12
Chromosome idchr5
Chromosome position43858572
Reported geneIntergenic
Mapped geneNNT - RNU6-381P
Upstream gene id23530
Downstream gene id106480576
SNP gene ids
Upstream gene distance153006
Downstream gene distance208052
SNP risk allelers75617866-A
SNPsrs75617866
Merged0
SNP id current75617866
Contextintergenic_variant
Intergenic1
Allele frequency0.965
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.077
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, chronic obstructive pulmonary disease, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003265