SNP Detail For rs75594032
1.Mapping Information
Human SNP ID rs75594032
Human chromosome chr3
Human SNP position 43744082
Pig chromosome chr13
Pig SNP position 29903535
2.Annotation Information
PubMed ID25574825
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25574825
StudyGenome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms.
Disease/TraitInflammatory skin disease
Initial sample2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls
Replication sampleNA
Region3p21.33
Chromosome idchr3
Chromosome position43744082
Reported geneABHD5
Mapped geneABHD5 - LOC105377054
Upstream gene id51099
Downstream gene id105377054
SNP gene ids
Upstream gene distance21357
Downstream gene distance10259
SNP risk allelers75594032-?
SNPsrs75594032
Merged0
SNP id current75594032
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000000004
Pvalue mlog9.39794000867203
P value text(Psoriasis)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 5200000]
CNVN
Mapped traitpsoriasis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000676
Study accessionGCST002740