SNP Detail For rs7551641
1.Mapping Information
Human SNP ID rs7551641
Human chromosome chr1
Human SNP position 119475304
Pig chromosome chr4
Pig SNP position 111554535
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region1p12
Chromosome idchr1
Chromosome position119475304
Reported geneHSD3B1, LOC391076, LOC391077, LOC644213
Mapped geneHSD3BP1 - LOC105378935
Upstream gene id391076
Downstream gene id105378935
SNP gene ids
Upstream gene distance1305
Downstream gene distance8034
SNP risk allelers7551641-C
SNPsrs7551641
Merged0
SNP id current7551641
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.001
P value0.000001
Pvalue mlog6
P value text
Or beta34.08
%95 Ci[3.52-329.69]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875