Human SNP ID | rs75493593 |
---|---|
Human chromosome | chr17 |
Human SNP position | 7041768 |
Pig chromosome | chr12 |
Pig SNP position | 54698803 |
PubMed ID | 24390345 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/24390345 |
Study | Sequence variants in SLC16A11 are a common risk factor for type 2 diabetes in Mexico. |
Disease/Trait | Type 2 diabetes |
Initial sample | 3,848 Mexican and other Latin American ancestry cases, 4,366 Mexican and other Latin American ancestry controls |
Replication sample | 896 Mexican American cases, 832 Mexican American controls, 2,768 East Asian ancestry cases, 2,880 East Asian ancestry controls, 1,082 South Asian ancestry cases, 1,105 South Asian ancestry controls, 1,874 European ancestry cases, 1,333 European ancestry c |
Region | 17p13.1 |
Chromosome id | chr17 |
Chromosome position | 7041768 |
Reported gene | SLC16A13, SLC16A11 |
Mapped gene | SLC16A11 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 162515 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs75493593-? |
SNPs | rs75493593 |
Merged | 0 |
SNP id current | 75493593 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000000000005 |
Pvalue mlog | 14.3010299956639 |
P value text | |
Or beta | 1.25 |
%95 Ci | [1.18-1.32] |
Platform | Illumina [9200000] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST002317 |