SNP Detail For rs75493593
1.Mapping Information
Human SNP ID rs75493593
Human chromosome chr17
Human SNP position 7041768
Pig chromosome chr12
Pig SNP position 54698803
2.Annotation Information
PubMed ID24390345
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/24390345
StudySequence variants in SLC16A11 are a common risk factor for type 2 diabetes in Mexico.
Disease/TraitType 2 diabetes
Initial sample3,848 Mexican and other Latin American ancestry cases, 4,366 Mexican and other Latin American ancestry controls
Replication sample896 Mexican American cases, 832 Mexican American controls, 2,768 East Asian ancestry cases, 2,880 East Asian ancestry controls, 1,082 South Asian ancestry cases, 1,105 South Asian ancestry controls, 1,874 European ancestry cases, 1,333 European ancestry c
Region17p13.1
Chromosome idchr17
Chromosome position7041768
Reported geneSLC16A13, SLC16A11
Mapped geneSLC16A11
Upstream gene id
Downstream gene id
SNP gene ids162515
Upstream gene distance
Downstream gene distance
SNP risk allelers75493593-?
SNPsrs75493593
Merged0
SNP id current75493593
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value0.000000000000005
Pvalue mlog14.3010299956639
P value text
Or beta1.25
%95 Ci[1.18-1.32]
PlatformIllumina [9200000] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST002317