Human SNP ID | rs7539409 |
---|---|
Human chromosome | chr1 |
Human SNP position | 83789052 |
Pig chromosome | chr6 |
Pig SNP position | 120358547 |
PubMed ID | 20061627 |
---|---|
Journal | J Alzheimers Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/20061627 |
Study | Genome-wide scan of copy number variation in late-onset Alzheimer__s disease. |
Disease/Trait | Alzheimer__s disease |
Initial sample | 331 European ancestry cases, 368 European ancestry controls |
Replication sample | NA |
Region | 1p31.1 |
Chromosome id | chr1 |
Chromosome position | 83789052 |
Reported gene | TTLL7 |
Mapped gene | LOC101927587 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101927587 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7539409-? |
SNPs | rs7539409 |
Merged | 0 |
SNP id current | 7539409 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.18 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 550000] |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST000484 |