SNP Detail For rs7533906
1.Mapping Information
Human SNP ID rs7533906
Human chromosome chr1
Human SNP position 79668438
Pig chromosome chr6
Pig SNP position 124018331
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region1p31.1
Chromosome idchr1
Chromosome position79668438
Reported geneFAM69A
Mapped geneLOC105378810 - COX6A1P1
Upstream gene id105378810
Downstream gene id1338
SNP gene ids
Upstream gene distance263018
Downstream gene distance827451
SNP risk allelers7533906-?
SNPsrs7533906
Merged0
SNP id current7533906
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.2982
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821