SNP Detail For rs75327846
1.Mapping Information
Human SNP ID rs75327846
Human chromosome chr13
Human SNP position 99804258
Pig chromosome chr11
Pig SNP position 75948103
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxypropylmercapturic acid levels in smokers
Initial sample362 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 438 European ancestry current smoker individuals, 449 Latino current smoker individuals, 704 Japanese ancestry current smoker individuals
Replication sampleNA
Region13q32.3
Chromosome idchr13
Chromosome position99804258
Reported geneNR
Mapped geneLOC101927437, CLYBL
Upstream gene id
Downstream gene id
SNP gene ids101927437, 171425
Upstream gene distance
Downstream gene distance
SNP risk allelers75327846-?
SNPsrs75327846
Merged
SNP id current75327846
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(Native Hawaiian)
Or beta0.9315
%95 Ci[NR] unit increase
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxypropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007014
Study accessionGCST002956