Human SNP ID | rs7531806 |
---|---|
Human chromosome | chr1 |
Human SNP position | 169681903 |
Pig chromosome | chr4 |
Pig SNP position | 88961642 |
PubMed ID | 24399259 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/24399259 |
Study | Two new susceptibility loci 1q24.2 and 11p11.2 confer risk to severe acne. |
Disease/Trait | Acne (severe) |
Initial sample | 1,031 Han Chinese ancestry cases, 1,031 Han Chinese ancestry controls |
Replication sample | 1,860 Han Chinese ancestry cases, 3,660 Han Chinese ancestry controls |
Region | 1q24.2 |
Chromosome id | chr1 |
Chromosome position | 169681903 |
Reported gene | SELL |
Mapped gene | SELP - SELL |
Upstream gene id | 6403 |
Downstream gene id | 6402 |
SNP gene ids | |
Upstream gene distance | 51764 |
Downstream gene distance | 8762 |
SNP risk allele | rs7531806-A |
SNPs | rs7531806 |
Merged | 0 |
SNP id current | 7531806 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.4207 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (fixed effect model) |
Or beta | 1.22 |
%95 Ci | [1.12-1.28] |
Platform | Illumina [809305] |
CNV | N |
Mapped trait | acne |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003894 |
Study accession | GCST002329 |