SNP Detail For rs7528859
1.Mapping Information
Human SNP ID rs7528859
Human chromosome chr1
Human SNP position 5600949
Pig chromosome chr6
Pig SNP position 61498338
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine with aura
Initial sample5,118 European ancestry cases, 74,239 European ancestry controls
Replication sampleNA
Region1p36.31
Chromosome idchr1
Chromosome position5600949
Reported geneintergenic
Mapped geneMIR4417 - LOC100287877
Upstream gene id100616489
Downstream gene id100287877
SNP gene ids
Upstream gene distance36806
Downstream gene distance104619
SNP risk allelers7528859-A
SNPsrs7528859
Merged0
SNP id current7528859
Contextintron_variant
Intergenic1
Allele frequency0.4
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.12
%95 Ci[1.07-1.18]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002080