Human SNP ID | rs7528859 |
---|---|
Human chromosome | chr1 |
Human SNP position | 5600949 |
Pig chromosome | chr6 |
Pig SNP position | 61498338 |
PubMed ID | 23793025 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23793025 |
Study | Genome-wide meta-analysis identifies new susceptibility loci for migraine. |
Disease/Trait | Migraine with aura |
Initial sample | 5,118 European ancestry cases, 74,239 European ancestry controls |
Replication sample | NA |
Region | 1p36.31 |
Chromosome id | chr1 |
Chromosome position | 5600949 |
Reported gene | intergenic |
Mapped gene | MIR4417 - LOC100287877 |
Upstream gene id | 100616489 |
Downstream gene id | 100287877 |
SNP gene ids | |
Upstream gene distance | 36806 |
Downstream gene distance | 104619 |
SNP risk allele | rs7528859-A |
SNPs | rs7528859 |
Merged | 0 |
SNP id current | 7528859 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.4 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.12 |
%95 Ci | [1.07-1.18] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST002080 |