SNP Detail For rs7526425
1.Mapping Information
Human SNP ID rs7526425
Human chromosome chr1
Human SNP position 211527316
Pig chromosome chr9
Pig SNP position 144719455
2.Annotation Information
PubMed ID21347282
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21347282
StudyGenome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project.
Disease/TraitHypertension
Initial sample4,069 African American cases, 3,848 African American controls
Replication sample1,372 African American cases, 1,482 African American controls
Region1q32.3
Chromosome idchr1
Chromosome position211527316
Reported geneSLC30A1
Mapped geneRD3 - SLC30A1
Upstream gene id343035
Downstream gene id7779
SNP gene ids
Upstream gene distance34399
Downstream gene distance47723
SNP risk allelers7526425-?
SNPsrs7526425
Merged1
SNP id current7526425
Contextintergenic_variant
Intergenic1
Allele frequency0.84
P value0.000001
Pvalue mlog6
P value text
Or beta1.1627907
%95 Ci[1.09-1.24]
PlatformAffymetrix [~ 2740000] (imputed)
CNVN
Mapped traithypertension
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000537
Study accessionGCST000973