Human SNP ID | rs7524258 |
---|---|
Human chromosome | chr1 |
Human SNP position | 7232169 |
Pig chromosome | chr6 |
Pig SNP position | 62806212 |
PubMed ID | 25158072 |
---|---|
Journal | Am J Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25158072 |
Study | Cross-Disorder Genome-Wide Analyses Suggest a Complex Genetic Relationship Between Tourette__s Syndrome and OCD. |
Disease/Trait | Tourette__s syndrome or obsessive-compulsive disorder |
Initial sample | 1,310 Ashkenazi Jewish, South African Afrikaner ancestry, and other European ancestry OCD cases, 834 Ashkenazi Jewish, French Canadian and other European ancestry Tourette__s Syndrome cases, 579 Ashkenazi Jewish, South African Afrikaner ancestry, French C |
Replication sample | NA |
Region | 1p36.23 |
Chromosome id | chr1 |
Chromosome position | 7232169 |
Reported gene | CAMTA1 |
Mapped gene | CAMTA1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23261 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7524258-T |
SNPs | rs7524258 |
Merged | 0 |
SNP id current | 7524258 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.4 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.16 |
%95 Ci | [NR] |
Platform | Illumina [7659573] (imputed) |
CNV | N |
Mapped trait | obsessive-compulsive disorder, Tourette syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004242, http://www.ebi.ac.uk/efo/EFO_0004895 |
Study accession | GCST002682 |