SNP Detail For rs7517537
1.Mapping Information
Human SNP ID rs7517537
Human chromosome chr1
Human SNP position 150141905
Pig chromosome chr4
Pig SNP position 108216788
2.Annotation Information
PubMed ID21294900
JournalBMC Med Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/21294900
StudyA genome-wide association study of serum uric acid in African Americans.
Disease/TraitUric acid levels
Initial sample1,017 African American individuals
Replication sampleNA
Region1q21.2
Chromosome idchr1
Chromosome position150141905
Reported geneVPS45
Mapped geneVPS45
Upstream gene id
Downstream gene id
SNP gene ids11311
Upstream gene distance
Downstream gene distance
SNP risk allelers7517537-T
SNPsrs7517537
Merged0
SNP id current7517537
Contextintron_variant
Intergenic0
Allele frequency0.14
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.227
%95 Ci[0.13-0.32] unit decrease
PlatformAffymetrix [2366856] (imputed)
CNVN
Mapped traituric acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004761
Study accessionGCST000963