SNP Detail For rs75045569
1.Mapping Information
Human SNP ID rs75045569
Human chromosome chr7
Human SNP position 143412115
Pig chromosome chr18
Pig SNP position 7077586
2.Annotation Information
PubMed ID25778476
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25778476
StudyA novel Alzheimer disease locus located near the gene encoding tau protein.
Disease/TraitAlzheimer__s disease in APOE e4- carriers
Initial sample7,184 cases, 26,968 controls
Replication sample718 European ancestry cases, 1,699 European ancestry controls
Region7q35
Chromosome idchr7
Chromosome position143412115
Reported geneEPHA1, TAS2R62P
Mapped geneEPHA1-AS1
Upstream gene id
Downstream gene id
SNP gene ids285965
Upstream gene distance
Downstream gene distance
SNP risk allelers75045569-T
SNPsrs75045569
Merged0
SNP id current75045569
Contextintron_variant
Intergenic0
Allele frequency0.83
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.1494253
%95 Ci[1.08-1.22]
PlatformNR [NR]
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST002817