SNP Detail For rs7503807
1.Mapping Information
Human SNP ID rs7503807
Human chromosome chr17
Human SNP position 80617311
Pig chromosome chr12
Pig SNP position 1832066
2.Annotation Information
PubMed ID23563607
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23563607
StudyGenome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.
Disease/TraitObesity
Initial sample93,015 European ancestry overweight individuals, 32,858 European ancestry class I obese individuals, 9,889 European ancestry class II obese individuals, 2,896 European ancestry class III obese individuals, up to 65,840 European ancestry controls
Replication sample65,332 European ancestry overweight individuals, 22,373 European ancestry class I obese individuals, 5,476 European ancestry class II obese individuals, 1,162 European ancestry class III obese individuals, up to 39,294 European ancestry controls
Region17q25.3
Chromosome idchr17
Chromosome position80617311
Reported geneRPTOR
Mapped geneRPTOR
Upstream gene id
Downstream gene id
SNP gene ids57521
Upstream gene distance
Downstream gene distance
SNP risk allelers7503807-A
SNPsrs7503807
Merged0
SNP id current7503807
Contextintron_variant
Intergenic0
Allele frequency0.57
P value0.00000002
Pvalue mlog7.69897000433601
P value text(Overweight)
Or beta1.04
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2800000] (imputed)
CNVN
Mapped traitobesity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001073
Study accessionGCST001953