SNP Detail For rs7499271
1.Mapping Information
Human SNP ID rs7499271
Human chromosome chr16
Human SNP position 20543937
Pig chromosome chr3
Pig SNP position 26146121
2.Annotation Information
PubMed ID24625756
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24625756
StudyGenetic determinants influencing human serum metabolome among African Americans.
Disease/TraitSerum metabolite levels
Initial sample1,260 African American individuals
Replication sampleNA
Region16p12.3
Chromosome idchr16
Chromosome position20543937
Reported geneACSM2B
Mapped geneACSM2B
Upstream gene id
Downstream gene id
SNP gene ids348158
Upstream gene distance
Downstream gene distance
SNP risk allelers7499271-A
SNPsrs7499271
Merged0
SNP id current7499271
Contextintron_variant
Intergenic0
Allele frequency0.25
P value0.00000000006
Pvalue mlog10.2218487496163
P value text(Phenylacetate)
Or beta0.25
%95 Ci[NR] unit increase
PlatformAffymetrix [2341704] (imputed)
CNVN
Mapped traitserum metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005653
Study accessionGCST002388